SubtiBank SubtiBank
Version comparison:

2017-02-27 15:02:042025-05-12 05:20:24

description

choline ABC transporter (binding protein)

choline and arsenocholine [SW|ABC transporter] (binding protein)

locus

BSU33710

BSU_33710

geneLength

918

921

product

choline ABC transporter (binding protein)

choline and arsenocholine [SW|ABC transporter] (binding protein)

ec

outlinks

bsu

BSU33710

BSU_33710

Gene

Coordinates on the chromosome (coding sequence)

3,460,503 -> 3,461,423

The protein

Paralogous protein(s)

[[protein|OpuCC]]

[[this]]

The protein

Structure

[PDB|3R6U]

[PDB|3R6U], [PDB|6EYQ] (in complex with choline) [pubmed|21658392]

[PDB|5NXX] (in complex with arsenocholine) [pubmed|29159878]

[PDB|6EYL] (in complex with carnitine)

[PDB|6EYG] (mutant in complex with betaine)

[PDB|6EYH] (mutant in complex with dimethylsulfoniopropionate)

Expression and Regulation

[[this]]

References

Original publications

22408163, 21366542, 21658392, 10092453, 9925583, 10216873, 21296969, 23960087, 23646920

22408163, 21366542, 21658392, 10092453, 9925583, 10216873, 21296969, 23960087, 23646920, 28256787, 29159878, 32373088

Gene

Coordinates

3,460,503 → 3,461,423

The protein

Catalyzed reaction/ biological activity

uptake of choline and arsenocholine [pubmed|29159878]

The protein

Protein family

OsmX family (with [[protein|OpuCC]], according to UniProt)

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

BKE33710 (Δ[[gene|opuBC]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE33710 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTTTCTTTTCATGAGCCGCC, downstream forward: _UP4_GAATCGTGAAAGGGGGAAGA

BKK33710 (Δ[[gene|opuBC]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK33710 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTTTCTTTTCATGAGCCGCC, downstream forward: _UP4_GAATCGTGAAAGGGGGAAGA